Tree Navigation

Navigate the hierarchical folder structure to find and manage your files.

Folder Structure

Files are organized in a tree with three top-level branches

uploads/

├── raw/ - Raw image stacks (TIFF/MRC)

├── annotations/ - Training masks

└── imported_models/ - External models you upload

models/

├── segmentation/<id>/ - Trained segmentation models

└── denoising/<id>/ - Trained denoising models

results/

├── segmentation/<id>/ - Segmentation outputs

├── denoising/<id>/ - Denoising outputs

├── meshes/<id>/ - Generated 3D meshes

├── preprocess/<id>/ - Preprocessing outputs

├── stitching/<id>/ - Stitching outputs

└── segcleanup/<id>/ - Segmentation cleanup outputs

Subfolders and per-job <id> folders are created on demand as modules run, so you only see the ones that hold files.

Expanding/Collapsing

Click a folder row to expand or collapse it. The arrow (▶/▼) indicates current state.

File Display

Each file shows

• Thumbnail (for TIFF images)

• Filename

• File size

• Upload time (relative, e.g., '2h ago')

• Action buttons on hover

Thumbnails

Image files display a small preview thumbnail. If thumbnail generation fails, a file type icon is shown instead.

Empty Folders

Only the three top-level directories — uploads, models, and results — always appear. Their subfolders are created on demand the first time a file lands in them, so an empty branch will not clutter the tree.